2016-12-22 15 views
0

私はJupyterのグラフで作業していますが、networkxは適切なグラフ表現を提供しないため、GraphVizパッケージを使用しようとしましたそこに:https://github.com/chebee7i/nxpdPATHにGraphVizフォルダを追加してもGraphViz実行ファイルにアクセスできない

私が最初nxpdパッケージをインポートしたが、私は引き分け()関数をしようとしたとき、私はこのエラーに直面していました:

InvocationException: GraphViz's executables not found.

私は最初、それが私があるpygraphvizパッケージを、インストールしていなかったためと考えられ私が実行しようとしましたが、私は今、このエラーに直面するもの:

Collecting pygraphviz 
    Using cached pygraphviz-1.3.1.zip 
Building wheels for collected packages: pygraphviz 
    Running setup.py bdist_wheel for pygraphviz: started 
    Running setup.py bdist_wheel for pygraphviz: finished with status 'error' 
    Complete output from command "D:\Program Files (x86)\Anaconda3\python.exe" -u -c "import setuptools, tokenize;__file__='C:\\Users\\VPELL_~1\\AppData\\Local\\Temp\\pip-build-vs56t5f2\\pygraphviz\\setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d C:\Users\VPELL_~1\AppData\Local\Temp\tmpqiovc8brpip-wheel- --python-tag cp35: 
    running bdist_wheel 
    running build 
    running build_py 
    creating build 
    creating build\lib.win-amd64-3.5 
    creating build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\agraph.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\graphviz.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\release.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\version.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\__init__.py -> build\lib.win-amd64-3.5\pygraphviz 
    creating build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_attributes.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_attribute_defaults.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_clear.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_drawing.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_edge_attributes.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_graph.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_html.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_layout.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_node_attributes.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_readwrite.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_string.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_subgraph.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_unicode.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\__init__.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    running egg_info 
    writing dependency_links to pygraphviz.egg-info\dependency_links.txt 
    writing top-level names to pygraphviz.egg-info\top_level.txt 
    writing pygraphviz.egg-info\PKG-INFO 
    warning: manifest_maker: standard file '-c' not found 

    reading manifest file 'pygraphviz.egg-info\SOURCES.txt' 
    reading manifest template 'MANIFEST.in' 
    warning: no previously-included files matching '*~' found anywhere in distribution 
    warning: no previously-included files matching '*.pyc' found anywhere in distribution 
    warning: no previously-included files matching '.svn' found anywhere in distribution 
    no previously-included directories found matching 'doc\build' 
    writing manifest file 'pygraphviz.egg-info\SOURCES.txt' 
    copying pygraphviz\graphviz.i -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\graphviz_wrap.c -> build\lib.win-amd64-3.5\pygraphviz 
    running build_ext 
    building 'pygraphviz._graphviz' extension 
    creating build\temp.win-amd64-3.5 
    creating build\temp.win-amd64-3.5\Release 
    creating build\temp.win-amd64-3.5\Release\pygraphviz 
    C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\BIN\x86_amd64\cl.exe /c /nologo /Ox /W3 /GL /DNDEBUG /MD "-ID:\Program Files (x86)\Anaconda3\include" "-ID:\Program Files (x86)\Anaconda3\include" "-IC:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\INCLUDE" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.10240.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\8.1\include\shared" "-IC:\Program Files (x86)\Windows Kits\8.1\include\um" "-IC:\Program Files (x86)\Windows Kits\8.1\include\winrt" /Tcpygraphviz/graphviz_wrap.c /Fobuild\temp.win-amd64-3.5\Release\pygraphviz/graphviz_wrap.obj 
    graphviz_wrap.c 
    pygraphviz/graphviz_wrap.c(2954): fatal error C1083: Cannot open include file: 'graphviz/cgraph.h': No such file or directory 
    error: command 'C:\\Program Files (x86)\\Microsoft Visual Studio 14.0\\VC\\BIN\\x86_amd64\\cl.exe' failed with exit status 2 

    ---------------------------------------- 
    Running setup.py clean for pygraphviz 
Failed to build pygraphviz 
Installing collected packages: pygraphviz 
    Running setup.py install for pygraphviz: started 
    Running setup.py install for pygraphviz: finished with status 'error' 
    Complete output from command "D:\Program Files (x86)\Anaconda3\python.exe" -u -c "import setuptools, tokenize;__file__='C:\\Users\\VPELL_~1\\AppData\\Local\\Temp\\pip-build-vs56t5f2\\pygraphviz\\setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record C:\Users\VPELL_~1\AppData\Local\Temp\pip-fplxc9at-record\install-record.txt --single-version-externally-managed --compile: 
    running install 
    include_dirs=None 
    library_dirs=None 
    running build 
    running build_py 
    creating build 
    creating build\lib.win-amd64-3.5 
    creating build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\agraph.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\graphviz.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\release.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\version.py -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\__init__.py -> build\lib.win-amd64-3.5\pygraphviz 
    creating build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_attributes.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_attribute_defaults.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_clear.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_drawing.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_edge_attributes.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_graph.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_html.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_layout.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_node_attributes.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_readwrite.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_string.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_subgraph.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\test_unicode.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    copying pygraphviz\tests\__init__.py -> build\lib.win-amd64-3.5\pygraphviz\tests 
    running egg_info 
    writing dependency_links to pygraphviz.egg-info\dependency_links.txt 
    writing pygraphviz.egg-info\PKG-INFO 
    writing top-level names to pygraphviz.egg-info\top_level.txt 
    warning: manifest_maker: standard file '-c' not found 

    reading manifest file 'pygraphviz.egg-info\SOURCES.txt' 
    reading manifest template 'MANIFEST.in' 
    warning: no previously-included files matching '*~' found anywhere in distribution 
    warning: no previously-included files matching '*.pyc' found anywhere in distribution 
    warning: no previously-included files matching '.svn' found anywhere in distribution 
    no previously-included directories found matching 'doc\build' 
    writing manifest file 'pygraphviz.egg-info\SOURCES.txt' 
    copying pygraphviz\graphviz.i -> build\lib.win-amd64-3.5\pygraphviz 
    copying pygraphviz\graphviz_wrap.c -> build\lib.win-amd64-3.5\pygraphviz 
    running build_ext 
    building 'pygraphviz._graphviz' extension 
    creating build\temp.win-amd64-3.5 
    creating build\temp.win-amd64-3.5\Release 
    creating build\temp.win-amd64-3.5\Release\pygraphviz 
    C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\BIN\x86_amd64\cl.exe /c /nologo /Ox /W3 /GL /DNDEBUG /MD -INone "-ID:\Program Files (x86)\Anaconda3\include" "-ID:\Program Files (x86)\Anaconda3\include" "-IC:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\INCLUDE" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.10240.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\8.1\include\shared" "-IC:\Program Files (x86)\Windows Kits\8.1\include\um" "-IC:\Program Files (x86)\Windows Kits\8.1\include\winrt" /Tcpygraphviz/graphviz_wrap.c /Fobuild\temp.win-amd64-3.5\Release\pygraphviz/graphviz_wrap.obj 
    graphviz_wrap.c 
    pygraphviz/graphviz_wrap.c(2954): fatal error C1083: Cannot open include file: 'graphviz/cgraph.h': No such file or directory 
    error: command 'C:\\Program Files (x86)\\Microsoft Visual Studio 14.0\\VC\\BIN\\x86_amd64\\cl.exe' failed with exit status 2 

    ---------------------------------------- 
    Failed building wheel for pygraphviz 
Command ""D:\Program Files (x86)\Anaconda3\python.exe" -u -c "import setuptools, tokenize;__file__='C:\\Users\\VPELL_~1\\AppData\\Local\\Temp\\pip-build-vs56t5f2\\pygraphviz\\setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record C:\Users\VPELL_~1\AppData\Local\Temp\pip-fplxc9at-record\install-record.txt --single-version-externally-managed --compile" failed with error code 1 in C:\Users\VPELL_~1\AppData\Local\Temp\pip-build-vs56t5f2\pygraphviz\ 
You are using pip version 8.1.2, however version 9.0.1 is available. 
You should consider upgrading via the 'python -m pip install --upgrade pip' command. 

StackOverflowの上で検索した後、私はこれらのディレクトリを追加しました:

D:\Program Files (x86)\Anaconda3\Lib\site-packages\graphviz\bin 
D:\Program Files (x86)\Anaconda3\Lib\site-packages\graphviz\include\graphviz 

私のPATHには、何も変更されませんでした。

ありがとうございました。

答えて

0

あなたが使用して、コマンドプロンプトでパスを追加しました:

PATH = %PATH%;<new path stuff> 

をか、システムのプロパティで環境変数を使用して、それを追加しましたか?

私はそれをシステム全体の幅広くするためにシステムプロパティを使って追加する必要がありました。コマンドプロンプトを使用してのみ追加した場合でも動作しませんでした。

0

os.environを使用してjupyterノート自体にパスを追加してみてください。

import os 
os.environ["PATH"] += os.pathsep + 'C:/Program Files (x86)/Graphviz2.38/bin/' 
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