1
私はすべての列のペアに対してpearsonの相関関係を取得しようとしています。私のmapreduceコードで次のエラーが発生しました
import java.io.DataInput;
import java.io.DataOutput;
import java.io.IOException;
import org.apache.hadoop.io.WritableComparable;
public class IndexPair implements WritableComparable<IndexPair>{
public static String[] labels
={"Year","Month","MEI","CO2","CH4","N2O","CFC-11","CFC-12","TSI","Aerosols","Temp"};
public long i,j;
public IndexPair()
{
}
public IndexPair(long i,long j) {
this.i=i;
this.j=j;
}
@Override
public void readFields(DataInput in) throws IOException {
i = in.readLong();
j = in.readLong();
}
@Override
public void write(DataOutput out) throws IOException {
out.writeLong(i);
out.writeLong(j);
}
@Override
public int compareTo(IndexPair o) {
Long i1 = i;
Long j1 = j;
Long i2 = o.i;
Long j2 = o.j;
int result = i1.compareTo(i2);
if (0 == result) {
return j1.compareTo(j2);
}
return result;
}
@Override
public String toString()
{
return "Corelation between column "+labels[(int) i]+"-->"+ labels[(int)j];
}
}
と値のペアのためのコードがthisoneです：IndexPairのコードはこの1つである
import java.io.IOException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.DoubleWritable;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.Job;
import org.apache.hadoop.mapreduce.Mapper;
import org.apache.hadoop.mapreduce.Reducer;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
public class Pearson
{
public static class MyMapper extends Mapper<LongWritable,Text,IndexPair,ValuePair>{
public void map(LongWritable key, Text value, Context context) throws IOException, InterruptedException {
String line = value.toString();
String[] tokens = line.split(",");
double[] arr = toDouble(tokens);
for(int i=0; i < arr.length; i++) {
for(int j=i+1; j < arr.length; j++) {
IndexPair k2 = new IndexPair(i, j);
ValuePair v2 = new ValuePair(arr[i], arr[j]);
context.write(k2, v2);
}
}
}
public double[] toDouble(String[] tokens) {
double[] arr = new double[tokens.length];
for(int i=0; i < tokens.length; i++) {
arr[i] = Double.parseDouble(tokens[i]);
}
return arr;
}
}
public static class MyReduce extends Reducer<IndexPair,ValuePair,IndexPair,DoubleWritable>
{
public void reduce(IndexPair key, Iterable<ValuePair> values, Context context) throws IOException, InterruptedException {
double x = 0.0d;
double y = 0.0d;
double xx = 0.0d;
double yy = 0.0d;
double xy = 0.0d;
double n = 0.0d;
for(ValuePair pairs : values) {
x += pairs.v1;
y += pairs.v2;
xx += Math.pow(pairs.v1, 2.0d);
yy += Math.pow(pairs.v2, 2.0d);
xy += (pairs.v1 * pairs.v2);
n += 1.0d;
}
double numerator = xy - ((x * y)/n);
double denominator1 = xx - (Math.pow(x, 2.0d)/n);
double denominator2 = yy - (Math.pow(y, 2.0d)/n);
double denominator = Math.sqrt(denominator1 * denominator2);
double corr = numerator/denominator;
context.write(key, new DoubleWritable(corr));
}
}
public static void main(String[] args) throws Exception
{
Configuration conf = new Configuration();
Job job = Job.getInstance(conf, "Pearson's Correlation");
job.setJarByClass(Pearson.class);
job.setMapperClass(MyMapper.class);
job.setCombinerClass(MyReduce.class);
job.setReducerClass(MyReduce.class);
job.setMapOutputKeyClass(IndexPair.class);
job.setMapOutputValueClass(ValuePair.class);
job.setOutputKeyClass(IndexPair.class);
job.setOutputValueClass(DoubleWritable.class);
FileInputFormat.addInputPath(job, new Path(args[0]));
FileOutputFormat.setOutputPath(job, new Path(args[1]));
System.exit(job.waitForCompletion(true) ? 0 : 1);
}
}
そして： は、これは私のMapReduceのコードである
import java.io.DataInput;
import java.io.DataOutput;
import java.io.IOException;
import org.apache.hadoop.io.WritableComparable;
public class ValuePair implements WritableComparable<ValuePair>{
public double v1,v2;
public ValuePair()
{
}
public ValuePair(double i,double j)
{
v1=i;
v2=j;
}
@Override
public void readFields(DataInput in) throws IOException {
v1=in.readDouble();
v2=in.readDouble();
}
@Override
public void write(DataOutput out) throws IOException {
out.writeDouble(v1);
out.writeDouble(v2);
}
@Override
public int compareTo(ValuePair o) {
// comparator for value pair is not required....
return 0;
}
}
しかしWHNは私がしようとしていますこれを実行するには、次のエラーが発生します。
17/07/20 13:59:49 INFO mapreduce.Job: map 0% reduce 0%
17/07/20 13:59:53 INFO mapreduce.Job: Task Id : attempt_1500536519279_0007_m_000000_0, Status : FAILED
Error: java.io.IOException: wrong value class: class org.apache.hadoop.io.DoubleWritable is not class ValuePair
at org.apache.hadoop.mapred.IFile$Writer.append(IFile.java:194)
at org.apache.hadoop.mapred.Task$CombineOutputCollector.collect(Task.java:1411)
at org.apache.hadoop.mapred.Task$NewCombinerRunner$OutputConverter.write(Task.java:1728)
at org.apache.hadoop.mapreduce.task.TaskInputOutputContextImpl.write(TaskInputOutputContextImpl.java:89)
at org.apache.hadoop.mapreduce.lib.reduce.WrappedReducer$Context.write(WrappedReducer.java:105)
at Pearson$MyReduce.reduce(Pearson.java:66)
at Pearson$MyReduce.reduce(Pearson.java:1)
at org.apache.hadoop.mapreduce.Reducer.run(Reducer.java:171)
at org.apache.hadoop.mapred.Task$NewCombinerRunner.combine(Task.java:1749)
at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.sortAndSpill(MapTask.java:1639)
at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.flush(MapTask.java:1491)
at org.apache.hadoop.mapred.MapTask$NewOutputCollector.close(MapTask.java:723)
at org.apache.hadoop.mapred.MapTask.runNewMapper(MapTask.java:793)
at org.apache.hadoop.mapred.MapTask.run(MapTask.java:341)
at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:175)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1807)
at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:169)
job.setCombinerClass(MyReduce.class);
出力キーと値の型は、マッパーのものと同じでなければなりません：3210
ありがとうございました.... –