2011-11-11 6 views
0

誰かが任意のTSVファイルからmysqlテーブルを作成するPHPまたはPerlコードを指すことができますか?任意のTSVファイルからmysqlテーブルを作成するPHP/Perlコード

見つかったデータといくつかのパラメータに基づいて、ロジックを使用して各フィールドに適切なフィールドタイプを作成し、データベーステーブルを作成し、データをアップロードします。 (すなわち、テーブル構造は予め知られていない)。それはすべて交換する

(代わりに私は、その後、データを一致させるためにテーブル構造を変更すること、データを分析するために、SQLクエリを実行し、一般的なテキストタイプの初期テーブルを作成し、それを想像することができます。)

+0

確かguess_table.pl ...質問者は、彼らがStackOverflowの上の質問をいくつかの研究の努力を示すことが期待される –

+1

...私はあなたのためにそれをグーグルしてみましょう。私はここにそれを見ない。 – Zaid

+1

私はGoogleとStackで解決策を探していて、それを見つけられませんでした。ほとんどの情報は、TSVデータを分析して適切なmysqlテーブルスキーマを作成するのではなく、既に作成されたテーブルにTSVをロードすることです。実際にこの質問は、私が探しているキーワードのための#1のGoogleの結果です。 – Nicholas

答えて

2

私が見つけた唯一の解決策はでMYSQLクックブック http://www.kitebird.com/mysql-cookbook/

コードサンプルにでました:http://www.kitebird.com/mysql-cookbook/downloads-2ed.php

これは最初の一枚を行い... TSVデータを分析し、「CREATEを生成TABLE "に適しています。 TSVをテーブル構造にアップロードする第2の部分は単純で一般的です。

#!/usr/bin/perl 
# guess_table.pl - characterize the contents of a data file and use the 
# information to guess a CREATE TABLE statement for the file 

# Usage: guess_table.pl table_name data_file 

# To do: 
# - Use value range information for something. It's collected but not yet 
# used. For example, suggest better INT types. 
# - Get rid of nonnegative attribute; it can be assessed now from the range. 

# Load a data file and read column names and data values. 
# Guess the declaration for each of the columns based on what the data 
# values look like, and then generate an SQL CREATE TABLE statement for the 
# table. Because the column declarations are just guesses, you'll likely 
# want to edit the output, for example, to change a data type or 
# length. You may also want to add indexes. Nevertheless, using this 
# script can be easier than writing the CREATE TABLE statement by hand. 

# Some assumptions: 
# - Lines are tab-delimited, linefeed-terminated 
# - Dates consist of 3 numeric parts, separated by - or /, in y/m/d order 

# Here are some ways that guess_table.pl could be improved. Each of 
# them would make it smarter, albeit at the cost of increased processing 
# requirements. Some of the suggestions are likely impractical for really 
# huge files. 

# - For numeric columns, use min/max values to better guess the type. 
# - Keep track of the number of unique values in a column. If there 
# aren't many, the column might be a good candidate for being an ENUM. 
# Testing should not be case sensitive, because ENUM columns are not 
# case sensitive. 
# - Make the date guessing code smarter. Have it recognize non-ISO format 
# and attempt to make suggestions that a column needs to be reformatted. 
# (This actually needs to see entire column, because that would help 
# it distinguish U.S. from British formats WRT order of month and day.) 
# This would need to track min/max for each of the three date parts. 
# - If all values in a column are unique, suggest that it should be a PRIMARY 
# KEY or a UNIQUE index. 
# - For DATETIME columns, allow some times to be missing without flagging 
# column as neither DATE nor TIME. 

# Paul DuBois 
# [email protected] 
# 2002-01-31 

# 2002-01-31 
# - Created. 
# 2002-02-19 
# - Add code to track ranges for numeric columns and for the three date 
# subparts of columns that look like they contain dates. 
# 2002-02-20 
# - Added --lower and --upper options to force column labels to lowercase 
# or uppercase. 
# 2002-03-01 
# - For character columns longer than 255 characters, choose TEXT type based 
# on maximum length. 
# 2002-04-04 
# - Add --quote-names option to quote table and column names `like this`. 
# The resulting statement requires MySQL 3.23.6 or higher. 
# 2002-07-16 
# - Fix "uninitialized value" warnings resulting from missing columns in 
# data lines. 
# - Don't attempt to assess date characteristics for columns that are always 
# empty. 
# 2005-12-28 
# - Make --quote-names the default, add --skip-quote-names option so that 
# identifier quoting can be turned off. 
# - Default data type now is VARCHAR, not CHAR. 
# 2006-06-10 
# - Emit UNSIGNED for double/decimal columns if they're unsigned. 

use strict; 
use warnings; 
use Getopt::Long; 
$Getopt::Long::ignorecase = 0; # options are case sensitive 
$Getopt::Long::bundling = 1; # allow short options to be bundled 

# ---------------------------------------------------------------------- 

# Create information structures to use for characterizing each column in 
# in the data file. We need to know whether any nonnumeric values are 
# found, whether numeric values are always integers, and the maximum length 
# of column values. 

# Argument is the array of column labels. 
# Creates an array of hash references and returns a reference to that array. 

sub init_col_info 
{ 
my @labels = @_; 
my @col_info; 

    for my $i (0 .. @labels - 1) 
    { 
     my $info = { }; 
     $info->{label} = $labels[$i]; 
     $info->{max_length} = 0; 

     # these can be tested directly, so they're set false until found 
     # to be true 
     $info->{hasempty} = 0; # has empty values 
     $info->{hasnonempty} = 0; # has nonempty values 

     # these can be assessed only by seeing all the values in the 
     # column, so they're set true until discovered by counterexample 
     # to be false 
     $info->{numeric} = 1;  # used to detect general numeric types 
     $info->{integer} = 1;  # used to detect INT 
     $info->{nonnegative} = 1; # used to detect UNSIGNED 
     $info->{temporal} = 1; # used to detect general temporal types 
     $info->{date} = 1;  # used to detect DATE 
     $info->{datetime} = 1; # used to detect DATETIME 
     $info->{time} = 1;  # used to detect TIME 

     # track min/max value for numeric columns 
     $info->{min_val} = undef; 
     $info->{max_val} = undef; 

     # track min/max for each of three date parts 
     $info->{date_range} = [ undef, undef, undef]; 

     push (@col_info, $info); 
    } 
    return (\@col_info); 
} 

sub print_create_table 
{ 
my ($tbl_name, $col_info_list, $quote) = @_; 
my $ncols = @{$col_info_list}; 
my $s; 
my $extra = ""; 

    $quote = ($quote ? "`" : "");  # quote names? 
    for my $i (0 .. $ncols - 1) 
    { 
     my $info = $col_info_list->[$i]; 

     $s .= ",\n" if $i > 0; 
     $s .= $extra if $extra ne ""; 
     $extra = ""; 

     $s .= " $quote$info->{label}$quote "; 

     if (!$info->{hasnonempty}) # column is always empty, make wild guess 
     { 
      $s .= "CHAR(10) /* NOTE: column is always empty */"; 
      next; 
     } 

     # if the column has nonempty values but one of 
     # these hasn't been ruled out, that's a problem 
     if ($info->{numeric} && $info->{temporal}) 
     { 
      die "Logic error: $info->{label} was characterized as both" 
    . " numeric and temporal\n"; 
     } 

     if ($info->{numeric}) 
     { 
      if ($info->{integer}) 
      { 
    $s .= "INT"; 
## TO DO: use range to make guess about type 
    # Print "might be YEAR" if in range...(0, 1901-2155) 
      } 
      else 
      { 
    $s .= "DOUBLE"; 
      } 
      $s .= " UNSIGNED" if $info->{nonnegative}; 
     } 
     elsif ($info->{temporal}) 
     { 
      # if a date column looks more like a U.S. or British 
      # date, add some comments to that effect 
      if (exists ($info->{date_type})) 
      { 
    my $ref = $info->{date_type}; 
    $extra .= " # $info->{label} might be a U.S. date\n" 
      if $ref->{us}; 
    $extra .= " # $info->{label} might be a British date\n" 
      if $ref->{br}; 
      } 
      if ($info->{date}) 
      { 
    $s .= "DATE"; 
      } 
      elsif ($info->{datetime}) 
      { 
    $s .= "DATETIME"; 
      } 
      elsif ($info->{time}) 
      { 
    $s .= "TIME"; 
      } 
      else 
      { 
    die "Logic error: $info->{label} is flagged as temporal, but" 
     . " not as any of the temporal types\n"; 
      } 
     } 
     else 
     { 
      if ($info->{max_length} < 256) 
      { 
    $s .= "VARCHAR($info->{max_length})"; 
      } 
      elsif ($info->{max_length} < 65536) 
      { 
    $s .= "TEXT"; 
      } 
      elsif ($info->{max_length} < 16777216) 
      { 
    $s .= "MEDIUMTEXT"; 
      } 
      else 
      { 
    $s .= "LONGTEXT"; 
      } 
     } 
     # if a column doesn't have empty values, guess that it cannot be NULL 
     $s .= " " . ($info->{hasempty} ? "NULL" : "NOT NULL"); 
    } 

    $s = "CREATE TABLE $quote$tbl_name$quote\n(\n$s\n);\n"; 
    print $s; 
} 

sub print_report 
{ 
my $col_info_list = shift; 
my $ncols = @{$col_info_list}; 
my $s; 

    for my $i (0 .. $ncols - 1) 
    { 
     my $info = $col_info_list->[$i]; 

     printf "Column %d: %s\n", $i+1, $info->{label}; 
     if (!$info->{hasnonempty}) # column is always empty 
     { 
      print " column is always empty\n"; 
      next; 
     } 

     # if the column has nonempty values but one of 
     # these hasn't been ruled out, that's a problem 
     if ($info->{numeric} && $info->{temporal}) 
     { 
      die "Logic error: $info->{label} was characterized as both" 
    . " numeric and temporal\n"; 
     } 

     print " column has empty values: " 
    . ($info->{hasempty} ? "yes" : "no") . "\n"; 
     printf " column value maximum length = %d\n", $info->{max_length}; 

     if ($info->{numeric}) 
     { 
      printf " column is numeric (range: %g - %g)\n", 
       $info->{min_val}, $info->{max_val}; 
      if ($info->{integer}) 
      { 
    print " column is integer\n"; 
    if ($info->{nonnegative}) 
    { 
     print " column is nonnegative\n"; 
    } 
      } 
     } 
     elsif ($info->{temporal}) 
     { 
      if ($info->{date}) 
      { 
    my $ref = $info->{date_range}; 
    print " column contains date values"; 
    printf " (part ranges: %d - %d, %d - %d, %d - %d)\n", 
       $ref->[0]->{min}, $ref->[0]->{max}, 
       $ref->[1]->{min}, $ref->[1]->{max}, 
       $ref->[2]->{min}, $ref->[2]->{max}; 
    $ref = $info->{date_type}; 
    printf " most likely date types: ISO: %s; U.S.: %s; British: %s\n", 
       ($ref->{iso} ? "yes" : "no"), 
       ($ref->{us} ? "yes" : "no"), 
       ($ref->{br} ? "yes" : "no"); 
      } 
      elsif ($info->{datetime}) 
      { 
    my $ref = $info->{date_range}; 
    print " column contains date+time values"; 
    printf " (part ranges: %d - %d, %d - %d, %d - %d)\n", 
       $ref->[0]->{min}, $ref->[0]->{max}, 
       $ref->[1]->{min}, $ref->[1]->{max}, 
       $ref->[2]->{min}, $ref->[2]->{max}; 
    $ref = $info->{date_type}; 
    printf " most likely date types: ISO: %s; U.S.: %s; British: %s\n", 
       ($ref->{iso} ? "yes" : "no"), 
       ($ref->{us} ? "yes" : "no"), 
       ($ref->{br} ? "yes" : "no"); 
      } 
      elsif ($info->{time}) 
      { 
    print " column contains time values\n"; 
      } 
      else 
      { 
    die "Logic error: $info->{label} is flagged as temporal, but" 
     . " not as any of the temporal types\n"; 
      } 
     } 
     else 
     { 
      print " column appears to be a string" 
    . " (cannot further narrow the type)\n"; 
     } 
    } 
} 

# ---------------------------------------------------------------------- 

my $prog = "guess_table.pl"; 
my $usage = <<EOF; 
Usage: $prog [options] [data_file] 

Options: 
--help 
     Print this message 
--labels, -l 
     Interpret first input line as row of table column labels 
     (default = c1, c2, ...) 
--lower, --upper 
     Force column labels to be in lowercase or uppercase 
--quote-names, --skip-quote-names 
    Quote or do not quote table and column identifiers with `` characters 
    in case they are reserved words (default = quote identifiers) 
--report , -r 
     Report mode; print findings rather than generating a CREATE 
     TABLE statement 
--table=tbl_name, -t tbl_name 
     Specify table name (default = t) 
EOF 

my $help; 
my $labels;  # expect a line of column labels? 
my $tbl_name = "t"; # table name (default: t) 
my $report; 
my $lower; 
my $upper; 
my $quote_names = 1; 
my $skip_quote_names; 

GetOptions (
    # =s means a string value is required after the option 
    "help"    => \$help,   # print help message 
    "labels|l"   => \$labels,   # expect row of column labels 
    "table|t=s"   => \$tbl_name,  # table name 
    "report|r"   => \$report,   # report mode 
    "lower"    => \$lower,   # lowercase labels 
    "upper"    => \$upper,   # uppercase labels 
    "quote-names"  => \$quote_names,  # quote identifiers 
    "skip-quote-names" => \$skip_quote_names # don't quote identifiers 
) or die "$usage\n"; 

die "$usage\n" if defined $help; 

$report = defined ($report); # convert defined/undefined to boolean 
$lower = defined ($lower); 
$upper = defined ($upper); 
$quote_names = defined ($quote_names); 
$quote_names = 0 if defined ($skip_quote_names); 

die "--lower and --upper were both specified; that makes no sense\n" 
      if $lower && $upper; 

my $line; 
my $line_count = 0; 
my @labels; # column labels 
my $ncols; # number of columns 
my $col_info_list; 

# If labels are expected, read the first line to get them 
if ($labels) 
{ 
    defined ($line = <>) or die; 
    chomp ($line); 
    @labels = split (/\t/, $line); 
} 

# Arrays to hold line numbers of lines with too many/too few fields. 
# The first line in the file is assumed to be representative. The 
# number of fields it contains becomes the norm against which any following 
# lines are assessed. 

my @excess_fields; 
my @too_few_fields; 

while (<>) 
{ 
    chomp ($line = $_); 
    ++$line_count; 
    if (!defined ($ncols)) # don't know this until first data line read 
    { 
     # determine number of columns (assume no more than 10,000) 
     my @val = split (/\t/, $line, 10000); 
     $ncols = @val; 
     if (@labels) # label count must match data column count 
     { 
      die "Label count doesn't match data column count\n" 
       if $ncols != @labels; 
     } 
     else  # if there were no labels, create them 
     { 
      @labels = map { "c" . $_ } 1 .. $ncols; 
     } 
     $col_info_list = init_col_info (@labels); 
    } 

    my @val = split (/\t/, $line, 10000); 
    push (@excess_fields, $line_count) if @val > $ncols; 
    push (@too_few_fields, $line_count) if @val < $ncols; 
    for my $i (0 .. $ncols - 1) 
    { 
     my $val = ($i < @val ? $val[$i] : ""); # use "" if field is missing 
     my $info = $col_info_list->[$i]; 

     $info->{max_length} = length ($val) 
      if $info->{max_length} < length ($val); 

     if ($val eq "") 
     { 
      # column does have empty values 
      $info->{hasempty} = 1; 
      next; # no other tests apply 
     } 
     $info->{hasnonempty} = 1; 

     # perform numeric tests if no nonnumeric values have yet been seen 

     if ($info->{numeric}) 
     { 
      # numeric test (doesn't recognize scientific notation) 
      if ($val =~ /^[-+]?(\d+(\.\d*)?|\.\d+)$/) 
      { 
    # not int if contains decimal point 
    $info->{integer} = 0 if $val =~ /\./; 
    # not unsigned if begins with minus sign 
    $info->{nonnegative} = 0 if $val =~ /^-/; 

    # track min/max value 
    $info->{min_val} = $val 
     if !defined ($info->{min_val}) || $info->{min_val} > $val; 
    $info->{max_val} = $val 
     if !defined ($info->{max_val}) || $info->{max_val} < $val; 
      } 
      else 
      { 
    # column contains nonnumeric information 
    $info->{numeric} = 0; 
    $info->{integer} = 0; 
      } 
     } 

     # perform temporal tests if no nontemporal values have yet been seen 

     if ($info->{temporal}) 
     { 
      # date/datetime test 
      # allow date, date hour:min, date hour:min:sec 
      if (($info->{date} || $info->{datetime}) 
    && $val =~ /^(\d+)[-\/](\d+)[-\/](\d+)\s*(\d+:\d+(:\d+)?)?$/) 
      { 
    # it's not a time 
    $info->{time} = 0; 

    # not a date if time part was present; not a 
    # datetime if no time part was present 
    $info->{ defined ($4) ? "date" : "datetime" } = 0; 

    # use the first three parts to track range of date parts 
    my @val = ($1, $2, $3); 
    my $ref = $info->{date_range}; 
    foreach my $i (0 .. 2) 
    { 
     # if this is the first value we've checked, create the 
     # structure to hold the min and max; otherwise compare 
     # the stored min/max to the current value 
     if (!defined ($ref->[$i])) 
     { 
      $ref->[$i]->{min} = $val[$i]; 
      $ref->[$i]->{max} = $val[$i]; 
      next; 
     } 
     $ref->[$i]->{min} = $val[$i] 
      if $ref->[$i]->{min} > $val[$i]; 
     $ref->[$i]->{max} = $val[$i] 
      if $ref->[$i]->{max} < $val[$i]; 
    } 
      } 
      # time test 
      # allow hour:min, hour:min:sec 
      elsif ($info->{time} && $val =~ /^\d+:\d+(:\d+)?$/) 
      { 
    # it's not a date or datetime 
    $info->{date} = 0; 
    $info->{datetime} = 0; 
      } 
      else 
      { 
    # column contains nontemporal information 
    $info->{temporal} = 0; 
      } 
     } 
    } 
} 

die "Input contained no data lines\n" if $line_count == 0; 
die "Input lines all were empty\n" if $ncols == 0; 

# Look at columns that look like DATE or DATETIME columns and attempt 
# to determine whether they appear to be in ISO, U.S., or British format. 
# (Skip columns that are always empty, because these assessments cannot 
# be made for such columns.) 

for my $i (0 .. $ncols - 1) 
{ 
    my $info = $col_info_list->[$i]; 
    next unless $info->{hasnonempty}; 
    next unless $info->{temporal} && ($info->{date} || $info->{datetime}); 
    my $ref = $info->{date_range}; 
    # assume that the column is valid as each of the types until ruled out 
    my $valid_as_iso = 1; # [CC]YY-MM-DD 
    my $valid_as_us = 1; # MM-DD-[CC]YY 
    my $valid_as_br = 1; # DD-MM-[CC]YY 
    # first segment is U.S. month, British day 
    my $min = $ref->[0]->{min}; 
    my $max = $ref->[0]->{max}; 
    $valid_as_us = 0 if $min < 0 || $max > 12; 
    $valid_as_br = 0 if $min < 0 || $max > 31; 
    # second segment is U.S. day, British month, ISO month 
    $min = $ref->[1]->{min}; 
    $max = $ref->[1]->{max}; 
    $valid_as_us = 0 if $min < 0 || $max > 31; 
    $valid_as_br = 0 if $min < 0 || $max > 12; 
    $valid_as_iso = 0 if $min < 0 || $max > 12; 
    # third segment is ISO day 
    $min = $ref->[2]->{min}; 
    $max = $ref->[2]->{max}; 
    $valid_as_iso = 0 if $min < 0 || $max > 31; 
    if (!$valid_as_iso && !$valid_as_us && !$valid_as_br) 
    { 
     $info->{temporal} = 0; # huh! guess it's not a date after all 
    } 
    else # save date type results for later 
    { 
     $info->{date_type}->{iso} = $valid_as_iso; 
     $info->{date_type}->{us} = $valid_as_us; 
     $info->{date_type}->{br} = $valid_as_br; 
    } 
} 


warn "# Number of lines = $line_count, columns = $ncols\n"; 
warn "# Number of lines with too few fields: " . scalar (@too_few_fields) . "\n" 
        if @too_few_fields; 
warn "# Number of lines with excess fields: " . scalar (@excess_fields) . "\n" 
        if @excess_fields; 

if ($report) 
{ 
    print_report ($col_info_list); 
} 
else 
{ 
    for my $i (0 .. $ncols - 1) 
    { 
     my $info = $col_info_list->[$i]; 
     $info->{label} = lc ($info->{label}) if $lower; 
     $info->{label} = uc ($info->{label}) if $upper; 
    } 
    print_create_table ($tbl_name, $col_info_list, $quote_names); 
} 
0

私のアドバイスCSVインポータを使用すると、インターネット上にPHPのサンプルコードがたくさんあります。例えば。 http://php.net/manual/en/function.fgetcsv.php

$csv = str_replace("\t", ",", $tsv); 
+0

私はそのリンクを見ました。記述しているCSVインポータは、データに基づいて適切なテーブル構造を作成しますか?もしそうなら、質問に答えさせるためのリンクを提供してもらえますか? – Nicholas

+0

TSVファイルにヘッダーがありますか?それはありませんか?ヘッダーがある場合は、ヘッダーの名前に基づいて構造体(テーブル)を作成し、構造体を手動で作成する必要があります。 – Dimme

+0

ヘッダーはスキーマの他の要素ではなくフィールド名を与えます(データ型、長さ、notnull、符号なし、一意性) – Nicholas

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